Whole-Genome Sequence of Hafnia alvei HUMV-5920, a Human Isolate
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چکیده
منابع مشابه
Whole-Genome Sequence of Hafnia alvei HUMV-5920, a Human Isolate
A clinical isolate of Hafnia alvei (strain HUMV-5920) was obtained from a urine sample from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time (SMRT) sequencing, which resulted in a chromosome with 4.5 Mb and a circular contig of 87 kb. About 4,146 protein-coding genes are predicted from this assembly.
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BACKGROUND Members of the genus Hafnia have been isolated from the feces of mammals, birds, reptiles, and fish, as well as from soil, water, sewage, and foods. Hafnia alvei is an opportunistic pathogen that has been implicated in intestinal and extraintestinal infections in humans. However, its pathogenicity is still unclear. In this study, we isolated H. alvei from human feces and performed se...
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ژورنال
عنوان ژورنال: Genome Announcements
سال: 2016
ISSN: 2169-8287
DOI: 10.1128/genomea.00556-16